Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015787974.1_cds_XP_016441394.1_345
CDS Infomation

[gene=LOC107766854] [db_xref=GeneID:107766854] [protein=mechanosensitive ion channel protein 1, mitochondrial-like] [protein_id=XP_016441394.1] [location=join(57421..58172,58254..58531,68734..68834,69832..69939,70777..70998,76706..76807)] [gbkey=CDS]
Sequence

ATGGCAGCAATTAGGTTTTCAACGTTGACAAGAACCCTTAGTTCCTCTTTAAGATTAGCA
AATCAGGTTGATGTCAGACCTTCATTCGCTTGTGTAAATAGTAATCACTACGCTAGAGAA
ACCGCCTATTCCAAAAGCTATGCTGCCCCCAAATGTTTCGATATGAGGGGTATACACTCT
GCTTGTGTGCCCAATCATGTTACTCCATATCTTAGTGGGCTATTTGATAATAAAAATTTG
AGGGGAAGTATCTCAATTGTTGGGACTAGCCCCATATGGAATAGTCGATGGTATTCATCG
TCTGTTAATAGTAAAGGAGATATTCTTAAGGGTTCAGAAGTTTCAGCTGGTGCAACTGGG
TCTGATATGGATACAAGTGGTGTTGGTGGAAGTGAATGGATTGGTAAGGTTAAGGAAGCT
TGGCAAAGAACCATAGATGCTGTGACTTATACTGGGGAAAAGGCGAAAGAGGCATCTTCT
GAAATGACTCCTTATGTTGAACAAGTGCTTGATGCGCACCCTTATTTGAGAGATGTAATT
GTTCCGGTTGGTGGCACTTTAATTGGTACCTTGATGGCTTGGATCGTGATGCCAAGGCTT
TTGAGGAGATTTCACAAGTACTCAATGCAAGGCCCAGCTGCTTTGCTGCCTGGAAGCTCA
ATATGGGGGCAAGTTCCTTATGAGAAAAGTATTTGGGGTGCTATGGAGGACCCCGTTCGA
TATTTGATCACCTTCATGGCATTTTCACAGATCGCGGTGATGGTGGCACCAAGCACTGTC
GCATCACAATACCTTCTTCAGACTTGGAGAGGTGCTGCTATTCTTTCATTTGTCTGGTTT
CTACAGCGATGGAAAACAAATGTGATCAGCAGAGCTTTGGTTGTCAAGAGCCTTGAAAAA
GGTGACCGTGATCGGTTGTTAACTTTGGACAGAATCTCTTCCGTTGGCCTCTTCATCCTT
GGGCTAATGACTTTAGCTGAAGTTTGTGGAGTAGCCGTACAGTCTATTCTGACTGTTGGT
GGAATTGGAGGGGTGGCTACTGCTTTTGCTGCTAGAGACATCCTTGGTAATGTTCTCAGT
GGACTCTCCGTACAGCTTTCACAACCTTTTTCAGTTGGCGACACGATAAAAGCTGGATCA
GTGGAAGGTCAAGTGGTTGAAATGGGGCTCACCACCACATCATTGTTGACTGCAGAAAAG
TTTCCCGTTATTGTCCCAAATTCACTATTTTCTAGCCAGGTGATTGTGAATAAATCACGT
GCTCAATGGCGTGCCTTGGTCACTACAGTTCCTTTCCAAGTTGAAGACTTCGATAAGATT
CTCCAGATTTCAGATGATGTAAAAAACATGCTCAAATCTAATCCAAGTGTTTTCTTGGAA
AAGGAGGCACCATACTGCTACTTGTCTAAAATAGAAAAAACATATGCAGAGCTGACTCTT
GGGTGCAACTTAAGATATGCAAGCAAGGACAAATTGTTTTCAACACAGCAGGATATTCTT
CTGCAAGCAGCCCGAATAATTAAGCAACATGGGGGCAAACTGGCTGATCCATGGACTCAG
TGA

Peptide Sequence

PEP ID

XP_016441394.1
PEP Infomation

PREDICTED: mechanosensitive ion channel protein 1, mitochondrial-like [Nicotiana tabacum]
Sequence

MAAIRFSTLTRTLSSSLRLANQVDVRPSFACVNSNHYARETAYSKSYAAPKCFDMRGIHS
ACVPNHVTPYLSGLFDNKNLRGSISIVGTSPIWNSRWYSSSVNSKGDILKGSEVSAGATG
SDMDTSGVGGSEWIGKVKEAWQRTIDAVTYTGEKAKEASSEMTPYVEQVLDAHPYLRDVI
VPVGGTLIGTLMAWIVMPRLLRRFHKYSMQGPAALLPGSSIWGQVPYEKSIWGAMEDPVR
YLITFMAFSQIAVMVAPSTVASQYLLQTWRGAAILSFVWFLQRWKTNVISRALVVKSLEK
GDRDRLLTLDRISSVGLFILGLMTLAEVCGVAVQSILTVGGIGGVATAFAARDILGNVLS
GLSVQLSQPFSVGDTIKAGSVEGQVVEMGLTTTSLLTAEKFPVIVPNSLFSSQVIVNKSR
AQWRALVTTVPFQVEDFDKILQISDDVKNMLKSNPSVFLEKEAPYCYLSKIEKTYAELTL
GCNLRYASKDKLFSTQQDILLQAARIIKQHGGKLADPWTQ

Transcript Sequence

Gene sequence data has not been registered.